Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC092506.1-202ENST00000401022 528 ntBASIC18.69■□□□□ 0.58
CENPFP49454 BRWD1P1-201ENST00000401091 371 ntBASIC18.69■□□□□ 0.58
CENPFP49454 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPFP49454 AL353705.2-201ENST00000428243 662 ntBASIC18.69■□□□□ 0.58
CENPFP49454 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.69■□□□□ 0.58
CENPFP49454 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPFP49454 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPFP49454 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPFP49454 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CENPFP49454 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPFP49454 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPFP49454 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPFP49454 GOLGA2P4-201ENST00000441462 777 ntBASIC18.69■□□□□ 0.58
CENPFP49454 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CENPFP49454 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CENPFP49454 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPFP49454 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPFP49454 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.68■□□□□ 0.58
CENPFP49454 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.68■□□□□ 0.58
CENPFP49454 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPFP49454 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPFP49454 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.68■□□□□ 0.58
CENPFP49454 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPFP49454 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPFP49454 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CENPFP49454 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 CROCCP2-202ENST00000412962 2773 ntBASIC18.68■□□□□ 0.58
CENPFP49454 NOC2LP1-202ENST00000452600 2235 ntBASIC18.68■□□□□ 0.58
CENPFP49454 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 AC055876.2-201ENST00000531834 546 ntBASIC18.68■□□□□ 0.58
CENPFP49454 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPFP49454 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CENPFP49454 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.68■□□□□ 0.58
CENPFP49454 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPFP49454 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 AL133373.2-201ENST00000623187 2828 ntBASIC18.67■□□□□ 0.58
CENPFP49454 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.67■□□□□ 0.58
CENPFP49454 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.67■□□□□ 0.58
CENPFP49454 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CENPFP49454 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.67■□□□□ 0.58
CENPFP49454 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 AC012313.1-201ENST00000593393 3059 ntBASIC18.67■□□□□ 0.58
CENPFP49454 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 AC099336.1-201ENST00000417053 1171 ntBASIC18.67■□□□□ 0.58
CENPFP49454 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.67■□□□□ 0.58
CENPFP49454 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CENPFP49454 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.67■□□□□ 0.58
CENPFP49454 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.67■□□□□ 0.58
CENPFP49454 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.67■□□□□ 0.58
CENPFP49454 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.67■□□□□ 0.58
CENPFP49454 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CENPFP49454 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPFP49454 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPFP49454 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.66■□□□□ 0.58
CENPFP49454 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.66■□□□□ 0.58
CENPFP49454 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.66■□□□□ 0.58
CENPFP49454 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.66■□□□□ 0.58
CENPFP49454 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.66■□□□□ 0.58
CENPFP49454 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.66■□□□□ 0.58
CENPFP49454 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CENPFP49454 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPFP49454 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPFP49454 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms