Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1DP48730 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.8■□□□□ 0.28
CSNK1DP48730 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CSNK1DP48730 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSNK1DP48730 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CSNK1DP48730 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CSNK1DP48730 AD000864.1-201ENST00000624076 2295 ntBASIC16.79■□□□□ 0.28
CSNK1DP48730 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 AC254562.1-201ENST00000417586 456 ntBASIC16.79■□□□□ 0.28
CSNK1DP48730 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.79■□□□□ 0.28
CSNK1DP48730 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 AL135744.1-201ENST00000565098 629 ntBASIC16.79■□□□□ 0.28
CSNK1DP48730 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.79■□□□□ 0.28
CSNK1DP48730 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1DP48730 AL513210.1-201ENST00000629608 234 ntBASIC16.79■□□□□ 0.28
CSNK1DP48730 AC134684.3-201ENST00000641758 218 ntBASIC16.79■□□□□ 0.28
CSNK1DP48730 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.79■□□□□ 0.28
CSNK1DP48730 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1DP48730 HLA-A-202ENST00000376806 1854 ntBASIC16.79■□□□□ 0.28
CSNK1DP48730 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.79■□□□□ 0.28
CSNK1DP48730 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 AL031731.1-201ENST00000642131 2094 ntBASIC16.79■□□□□ 0.28
CSNK1DP48730 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSNK1DP48730 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 AC106886.4-201ENST00000623557 2502 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 AC016027.1-202ENST00000607927 1699 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1DP48730 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
CSNK1DP48730 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.78■□□□□ 0.28
CSNK1DP48730 SPDYE11-202ENST00000450699 704 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 AP000344.2-201ENST00000512987 629 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CSNK1DP48730 AC243562.1-201ENST00000560672 389 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 SPDYE9P-201ENST00000570642 692 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.78■□□□□ 0.28
CSNK1DP48730 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
CSNK1DP48730 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.78■□□□□ 0.28
CSNK1DP48730 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 GPALPP1-207ENST00000611650 899 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 SPDYE10P-202ENST00000612005 668 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 SPDYE8P-202ENST00000612377 668 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 AC079781.4-201ENST00000641908 219 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CSNK1DP48730 GPAA1P2-202ENST00000606848 1787 ntBASIC16.78■□□□□ 0.28
CSNK1DP48730 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CSNK1DP48730 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSNK1DP48730 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CSNK1DP48730 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms