Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.19■□□□□ 0.18
SLC6A12P48065 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 HCG4B-203ENST00000450128 991 ntBASIC16.19■□□□□ 0.18
SLC6A12P48065 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC6A12P48065 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC6A12P48065 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.19■□□□□ 0.18
SLC6A12P48065 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 CYP2T1P-202ENST00000641596 2535 ntBASIC16.19■□□□□ 0.18
SLC6A12P48065 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A12P48065 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC6A12P48065 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A12P48065 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 GPAA1P2-202ENST00000606848 1787 ntBASIC16.18■□□□□ 0.18
SLC6A12P48065 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC6A12P48065 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC6A12P48065 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC6A12P48065 AC005052.1-201ENST00000625181 2492 ntBASIC16.18■□□□□ 0.18
SLC6A12P48065 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SLC6A12P48065 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.18■□□□□ 0.18
SLC6A12P48065 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC6A12P48065 Z83851.2-201ENST00000609564 659 ntBASIC16.18■□□□□ 0.18
SLC6A12P48065 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC6A12P48065 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC6A12P48065 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
SLC6A12P48065 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A12P48065 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A12P48065 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A12P48065 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 AL662844.4-201ENST00000606367 2838 ntBASIC16.17■□□□□ 0.18
SLC6A12P48065 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A12P48065 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC6A12P48065 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A12P48065 HMGA1P7-201ENST00000406908 502 ntBASIC16.17■□□□□ 0.18
SLC6A12P48065 CRYGEP-201ENST00000412192 528 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms