Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC29.1■■■□□ 2.25
NCAPD3P42695 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC29.1■■■□□ 2.25
NCAPD3P42695 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC29.1■■■□□ 2.25
NCAPD3P42695 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC29.1■■■□□ 2.25
NCAPD3P42695 AL139010.1-201ENST00000454878 894 ntBASIC29.1■■■□□ 2.25
NCAPD3P42695 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
NCAPD3P42695 AC068587.3-201ENST00000526613 355 ntBASIC29.1■■■□□ 2.25
NCAPD3P42695 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC29.1■■■□□ 2.25
NCAPD3P42695 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC29.09■■■□□ 2.25
NCAPD3P42695 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
NCAPD3P42695 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC29.09■■■□□ 2.25
NCAPD3P42695 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC29.09■■■□□ 2.25
NCAPD3P42695 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NCAPD3P42695 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC29.09■■■□□ 2.25
NCAPD3P42695 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NCAPD3P42695 KRT8P13-201ENST00000463294 1010 ntBASIC29.09■■■□□ 2.25
NCAPD3P42695 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC29.09■■■□□ 2.25
NCAPD3P42695 RIT1-205ENST00000539040 919 ntTSL 2 BASIC29.09■■■□□ 2.25
NCAPD3P42695 AC124947.2-201ENST00000547118 1133 ntBASIC29.09■■■□□ 2.25
NCAPD3P42695 AC124283.3-201ENST00000570869 594 ntBASIC29.09■■■□□ 2.25
NCAPD3P42695 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NCAPD3P42695 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
NCAPD3P42695 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC29.09■■■□□ 2.25
NCAPD3P42695 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC29.09■■■□□ 2.25
NCAPD3P42695 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
NCAPD3P42695 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
NCAPD3P42695 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC29.08■■■□□ 2.25
NCAPD3P42695 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
NCAPD3P42695 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
NCAPD3P42695 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
NCAPD3P42695 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
NCAPD3P42695 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
NCAPD3P42695 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC29.08■■■□□ 2.25
NCAPD3P42695 AGER-203ENST00000375065 665 ntTSL 2 BASIC29.08■■■□□ 2.25
NCAPD3P42695 APOA1-205ENST00000375329 927 ntTSL 2 BASIC29.08■■■□□ 2.25
NCAPD3P42695 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
NCAPD3P42695 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC29.08■■■□□ 2.25
NCAPD3P42695 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC29.08■■■□□ 2.25
NCAPD3P42695 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC29.08■■■□□ 2.25
NCAPD3P42695 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC29.08■■■□□ 2.25
NCAPD3P42695 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC29.08■■■□□ 2.25
NCAPD3P42695 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC29.08■■■□□ 2.25
NCAPD3P42695 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
NCAPD3P42695 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
NCAPD3P42695 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 FO393414.2-201ENST00000405153 598 ntBASIC29.07■■■□□ 2.24
NCAPD3P42695 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC29.07■■■□□ 2.24
NCAPD3P42695 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC29.07■■■□□ 2.24
NCAPD3P42695 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC29.07■■■□□ 2.24
NCAPD3P42695 TDH-203ENST00000531764 1110 ntBASIC29.07■■■□□ 2.24
NCAPD3P42695 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC29.07■■■□□ 2.24
NCAPD3P42695 AC020765.3-201ENST00000613051 740 ntBASIC29.07■■■□□ 2.24
NCAPD3P42695 AC009542.2-202ENST00000619004 1067 ntBASIC29.07■■■□□ 2.24
NCAPD3P42695 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC29.07■■■□□ 2.24
NCAPD3P42695 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
NCAPD3P42695 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC29.07■■■□□ 2.24
NCAPD3P42695 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC29.06■■■□□ 2.24
NCAPD3P42695 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
NCAPD3P42695 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
NCAPD3P42695 FAM86HP-204ENST00000513466 959 ntBASIC29.06■■■□□ 2.24
NCAPD3P42695 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC29.06■■■□□ 2.24
NCAPD3P42695 AC036164.1-201ENST00000570544 333 ntBASIC29.06■■■□□ 2.24
NCAPD3P42695 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
NCAPD3P42695 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
NCAPD3P42695 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC29.06■■■□□ 2.24
NCAPD3P42695 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC29.06■■■□□ 2.24
NCAPD3P42695 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
NCAPD3P42695 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC29.06■■■□□ 2.24
NCAPD3P42695 TUBB8P12-201ENST00000308911 1335 ntBASIC29.05■■■□□ 2.24
NCAPD3P42695 TUBB7P-202ENST00000428444 1305 ntBASIC29.05■■■□□ 2.24
NCAPD3P42695 TUBB8P7-204ENST00000567960 1332 ntBASIC29.05■■■□□ 2.24
NCAPD3P42695 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
NCAPD3P42695 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC29.05■■■□□ 2.24
NCAPD3P42695 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC29.05■■■□□ 2.24
NCAPD3P42695 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC29.05■■■□□ 2.24
NCAPD3P42695 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
NCAPD3P42695 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC29.05■■■□□ 2.24
NCAPD3P42695 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
NCAPD3P42695 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
NCAPD3P42695 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC29.05■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms