Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TM4SF1P30408 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.63■□□□□ 0.89
TM4SF1P30408 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.63■□□□□ 0.89
TM4SF1P30408 AC092658.1-201ENST00000505836 891 ntBASIC20.63■□□□□ 0.89
TM4SF1P30408 SDHAP3-202ENST00000515467 728 ntBASIC20.63■□□□□ 0.89
TM4SF1P30408 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
TM4SF1P30408 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TM4SF1P30408 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 AL033527.4-201ENST00000641026 673 ntBASIC20.63■□□□□ 0.89
TM4SF1P30408 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.63■□□□□ 0.89
TM4SF1P30408 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.63■□□□□ 0.89
TM4SF1P30408 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.63■□□□□ 0.89
TM4SF1P30408 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TM4SF1P30408 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 KRT8P39-201ENST00000396270 1433 ntBASIC20.62■□□□□ 0.89
TM4SF1P30408 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TM4SF1P30408 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.62■□□□□ 0.89
TM4SF1P30408 TMEM14DP-201ENST00000422205 345 ntBASIC20.62■□□□□ 0.89
TM4SF1P30408 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.62■□□□□ 0.89
TM4SF1P30408 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TM4SF1P30408 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TM4SF1P30408 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 AC061975.2-201ENST00000581722 295 ntBASIC20.62■□□□□ 0.89
TM4SF1P30408 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.62■□□□□ 0.89
TM4SF1P30408 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TM4SF1P30408 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.62■□□□□ 0.89
TM4SF1P30408 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 AIRN-201ENST00000601203 4374 ntBASIC20.62■□□□□ 0.89
TM4SF1P30408 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TM4SF1P30408 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.61■□□□□ 0.89
TM4SF1P30408 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF1P30408 AC134043.2-201ENST00000624206 2238 ntBASIC20.61■□□□□ 0.89
TM4SF1P30408 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TM4SF1P30408 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
TM4SF1P30408 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF1P30408 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF1P30408 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 MEP1AP4-201ENST00000423244 1087 ntBASIC20.61■□□□□ 0.89
TM4SF1P30408 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.61■□□□□ 0.89
TM4SF1P30408 SERBP1P3-201ENST00000459980 809 ntBASIC20.61■□□□□ 0.89
TM4SF1P30408 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TM4SF1P30408 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.61■□□□□ 0.89
TM4SF1P30408 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.61■□□□□ 0.89
TM4SF1P30408 TPRX2P-201ENST00000535362 881 ntBASIC20.61■□□□□ 0.89
TM4SF1P30408 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.61■□□□□ 0.89
TM4SF1P30408 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.61■□□□□ 0.89
TM4SF1P30408 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.61■□□□□ 0.89
TM4SF1P30408 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.61■□□□□ 0.89
TM4SF1P30408 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.61■□□□□ 0.89
TM4SF1P30408 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TM4SF1P30408 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.61■□□□□ 0.89
TM4SF1P30408 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TM4SF1P30408 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.6■□□□□ 0.89
TM4SF1P30408 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TM4SF1P30408 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms