Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.65■■□□□ 1.06
RXRBP28702 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RXRBP28702 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.65■■□□□ 1.06
RXRBP28702 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RXRBP28702 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RXRBP28702 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RXRBP28702 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RXRBP28702 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RXRBP28702 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RXRBP28702 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RXRBP28702 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.64■■□□□ 1.05
RXRBP28702 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC21.64■■□□□ 1.05
RXRBP28702 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC21.64■■□□□ 1.05
RXRBP28702 MAGEA5-201ENST00000446757 942 ntBASIC21.64■■□□□ 1.05
RXRBP28702 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21.64■■□□□ 1.05
RXRBP28702 AC023310.1-201ENST00000554836 735 ntBASIC21.64■■□□□ 1.05
RXRBP28702 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RXRBP28702 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RXRBP28702 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
RXRBP28702 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RXRBP28702 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RXRBP28702 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.64■■□□□ 1.05
RXRBP28702 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RXRBP28702 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.64■■□□□ 1.05
RXRBP28702 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RXRBP28702 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 AP000997.3-201ENST00000623333 2250 ntBASIC21.63■■□□□ 1.05
RXRBP28702 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.63■■□□□ 1.05
RXRBP28702 FTLP1-201ENST00000449155 526 ntBASIC21.63■■□□□ 1.05
RXRBP28702 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 KRT90P-201ENST00000549264 1064 ntBASIC21.63■■□□□ 1.05
RXRBP28702 AC024267.1-201ENST00000582320 895 ntBASIC21.63■■□□□ 1.05
RXRBP28702 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RXRBP28702 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.63■■□□□ 1.05
RXRBP28702 AC005702.4-201ENST00000618393 416 ntBASIC21.63■■□□□ 1.05
RXRBP28702 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RXRBP28702 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.63■■□□□ 1.05
RXRBP28702 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RXRBP28702 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.63■■□□□ 1.05
RXRBP28702 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RXRBP28702 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RXRBP28702 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.62■■□□□ 1.05
RXRBP28702 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RXRBP28702 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.62■■□□□ 1.05
RXRBP28702 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.62■■□□□ 1.05
RXRBP28702 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.62■■□□□ 1.05
RXRBP28702 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC21.62■■□□□ 1.05
RXRBP28702 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC21.62■■□□□ 1.05
RXRBP28702 AP006547.1-201ENST00000563435 692 ntBASIC21.62■■□□□ 1.05
RXRBP28702 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.62■■□□□ 1.05
RXRBP28702 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.62■■□□□ 1.05
RXRBP28702 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.62■■□□□ 1.05
RXRBP28702 AC097724.1-201ENST00000609581 426 ntBASIC21.62■■□□□ 1.05
RXRBP28702 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.62■■□□□ 1.05
RXRBP28702 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RXRBP28702 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RXRBP28702 AC005332.7-201ENST00000614046 2005 ntBASIC21.62■■□□□ 1.05
RXRBP28702 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.61■■□□□ 1.05
RXRBP28702 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RXRBP28702 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.61■■□□□ 1.05
RXRBP28702 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RXRBP28702 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 BAATP1-201ENST00000412284 1225 ntBASIC21.61■■□□□ 1.05
RXRBP28702 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RXRBP28702 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms