Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.16■□□□□ 0.18
PTX3P26022 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTX3P26022 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTX3P26022 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTX3P26022 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTX3P26022 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.16■□□□□ 0.18
PTX3P26022 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTX3P26022 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTX3P26022 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 AC129492.6-201ENST00000611383 1305 ntBASIC16.16■□□□□ 0.18
PTX3P26022 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.16■□□□□ 0.18
PTX3P26022 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTX3P26022 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTX3P26022 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PTX3P26022 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTX3P26022 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.15■□□□□ 0.18
PTX3P26022 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.15■□□□□ 0.18
PTX3P26022 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.15■□□□□ 0.18
PTX3P26022 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.15■□□□□ 0.18
PTX3P26022 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.15■□□□□ 0.18
PTX3P26022 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.15■□□□□ 0.18
PTX3P26022 SLC25A6P2-201ENST00000497974 877 ntBASIC16.15■□□□□ 0.18
PTX3P26022 IGHV3-65-201ENST00000523210 341 ntBASIC16.15■□□□□ 0.18
PTX3P26022 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTX3P26022 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.15■□□□□ 0.18
PTX3P26022 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.15■□□□□ 0.18
PTX3P26022 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.15■□□□□ 0.18
PTX3P26022 AL773604.1-201ENST00000617417 272 ntBASIC16.15■□□□□ 0.18
PTX3P26022 AC148477.8-201ENST00000624298 468 ntBASIC16.15■□□□□ 0.18
PTX3P26022 AC018695.7-201ENST00000624587 2492 ntBASIC16.15■□□□□ 0.18
PTX3P26022 FAM215A-202ENST00000632077 792 ntBASIC16.15■□□□□ 0.18
PTX3P26022 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.15■□□□□ 0.18
PTX3P26022 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTX3P26022 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
PTX3P26022 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PTX3P26022 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTX3P26022 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PTX3P26022 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.14■□□□□ 0.18
PTX3P26022 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.14■□□□□ 0.18
PTX3P26022 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.14■□□□□ 0.17
PTX3P26022 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
PTX3P26022 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTX3P26022 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTX3P26022 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTX3P26022 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PTX3P26022 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTX3P26022 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTX3P26022 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PTX3P26022 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.14■□□□□ 0.17
PTX3P26022 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.14■□□□□ 0.17
PTX3P26022 TPM4P1-201ENST00000436100 807 ntBASIC16.14■□□□□ 0.17
PTX3P26022 HLA-J-202ENST00000469281 1241 ntBASIC16.14■□□□□ 0.17
PTX3P26022 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.14■□□□□ 0.17
PTX3P26022 AP002469.2-201ENST00000531724 424 ntBASIC16.14■□□□□ 0.17
PTX3P26022 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.14■□□□□ 0.17
PTX3P26022 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.14■□□□□ 0.17
PTX3P26022 AC012640.2-201ENST00000561606 901 ntBASIC16.14■□□□□ 0.17
PTX3P26022 AC091167.2-201ENST00000579581 588 ntBASIC16.14■□□□□ 0.17
PTX3P26022 MPDU1-223ENST00000582151 728 ntBASIC16.14■□□□□ 0.17
PTX3P26022 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PTX3P26022 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 AP002414.3-201ENST00000589352 1468 ntBASIC16.14■□□□□ 0.17
PTX3P26022 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTX3P26022 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTX3P26022 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTX3P26022 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms