Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.47□□□□□ -0.09
CCL1P22362 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.47□□□□□ -0.09
CCL1P22362 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.47□□□□□ -0.09
CCL1P22362 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 AC005412.3-201ENST00000580309 715 ntBASIC14.47□□□□□ -0.09
CCL1P22362 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.47□□□□□ -0.09
CCL1P22362 GGTLC5P-201ENST00000617623 998 ntBASIC14.47□□□□□ -0.09
CCL1P22362 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.47□□□□□ -0.09
CCL1P22362 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.47□□□□□ -0.09
CCL1P22362 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCL1P22362 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCL1P22362 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCL1P22362 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.46□□□□□ -0.09
CCL1P22362 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.46□□□□□ -0.09
CCL1P22362 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CCL1P22362 MIR1224-201ENST00000408193 85 ntBASIC14.46□□□□□ -0.09
CCL1P22362 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.46□□□□□ -0.09
CCL1P22362 RPS15P9-201ENST00000494093 319 ntBASIC14.46□□□□□ -0.09
CCL1P22362 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.46□□□□□ -0.09
CCL1P22362 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 PRELID1P1-202ENST00000567272 903 ntBASIC14.46□□□□□ -0.09
CCL1P22362 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.46□□□□□ -0.09
CCL1P22362 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.46□□□□□ -0.09
CCL1P22362 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.46□□□□□ -0.09
CCL1P22362 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 GPAA1P2-202ENST00000606848 1787 ntBASIC14.46□□□□□ -0.09
CCL1P22362 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CCL1P22362 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL1P22362 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL1P22362 AL365203.3-201ENST00000609742 2057 ntBASIC14.46□□□□□ -0.09
CCL1P22362 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.46□□□□□ -0.09
CCL1P22362 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL1P22362 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
CCL1P22362 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL1P22362 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CCL1P22362 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL1P22362 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.46□□□□□ -0.1
CCL1P22362 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL1P22362 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.46□□□□□ -0.1
CCL1P22362 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL1P22362 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL1P22362 AL596087.1-201ENST00000400979 1969 ntBASIC14.45□□□□□ -0.1
CCL1P22362 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL1P22362 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL1P22362 AC129492.6-201ENST00000611383 1305 ntBASIC14.45□□□□□ -0.1
CCL1P22362 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL1P22362 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms