Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.95□□□□□ -0.34
RAB4AP20338 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.95□□□□□ -0.34
RAB4AP20338 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.95□□□□□ -0.34
RAB4AP20338 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.95□□□□□ -0.34
RAB4AP20338 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB4AP20338 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 KRT8P7-201ENST00000533003 1432 ntBASIC12.95□□□□□ -0.34
RAB4AP20338 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 REXO1L11P-201ENST00000620964 1927 ntBASIC12.94□□□□□ -0.34
RAB4AP20338 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 KRT18P23-201ENST00000435622 1283 ntBASIC12.94□□□□□ -0.34
RAB4AP20338 AC011506.1-201ENST00000474329 610 ntBASIC12.94□□□□□ -0.34
RAB4AP20338 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 AL137784.2-201ENST00000607332 1000 ntBASIC12.94□□□□□ -0.34
RAB4AP20338 CR392000.1-201ENST00000624770 1228 ntBASIC12.94□□□□□ -0.34
RAB4AP20338 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAB4AP20338 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB4AP20338 AC023908.3-201ENST00000564211 3047 ntBASIC12.94□□□□□ -0.34
RAB4AP20338 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB4AP20338 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 REXO1L2P-201ENST00000425429 2069 ntBASIC12.93□□□□□ -0.34
RAB4AP20338 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 AC005089.1-201ENST00000619486 2241 ntBASIC12.93□□□□□ -0.34
RAB4AP20338 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
RAB4AP20338 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms