Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.2■□□□□ 0.82
COL11A2P13942 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL11A2P13942 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.2■□□□□ 0.82
COL11A2P13942 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL11A2P13942 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
COL11A2P13942 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.2■□□□□ 0.82
COL11A2P13942 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL11A2P13942 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL11A2P13942 AC092053.1-201ENST00000605787 1936 ntBASIC20.2■□□□□ 0.82
COL11A2P13942 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.2■□□□□ 0.82
COL11A2P13942 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.2■□□□□ 0.82
COL11A2P13942 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL11A2P13942 GGT4P-201ENST00000623672 1708 ntBASIC20.2■□□□□ 0.82
COL11A2P13942 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
COL11A2P13942 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COL11A2P13942 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.19■□□□□ 0.82
COL11A2P13942 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.19■□□□□ 0.82
COL11A2P13942 AC074044.1-201ENST00000609673 707 ntBASIC20.19■□□□□ 0.82
COL11A2P13942 AC133552.6-201ENST00000613406 534 ntBASIC20.19■□□□□ 0.82
COL11A2P13942 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
COL11A2P13942 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
COL11A2P13942 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COL11A2P13942 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.19■□□□□ 0.82
COL11A2P13942 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.19■□□□□ 0.82
COL11A2P13942 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
COL11A2P13942 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
COL11A2P13942 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.19■□□□□ 0.82
COL11A2P13942 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.19■□□□□ 0.82
COL11A2P13942 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL11A2P13942 AC015936.2-201ENST00000593177 259 ntBASIC20.19■□□□□ 0.82
COL11A2P13942 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.19■□□□□ 0.82
COL11A2P13942 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL11A2P13942 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COL11A2P13942 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 AL589702.1-201ENST00000641229 1509 ntBASIC20.18■□□□□ 0.82
COL11A2P13942 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.18■□□□□ 0.82
COL11A2P13942 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.18■□□□□ 0.82
COL11A2P13942 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.18■□□□□ 0.82
COL11A2P13942 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL11A2P13942 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 AC104989.1-201ENST00000519711 778 ntBASIC20.18■□□□□ 0.82
COL11A2P13942 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.18■□□□□ 0.82
COL11A2P13942 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.18■□□□□ 0.82
COL11A2P13942 MIR4538-201ENST00000581377 78 ntBASIC20.18■□□□□ 0.82
COL11A2P13942 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.18■□□□□ 0.82
COL11A2P13942 MIR8072-201ENST00000614241 80 ntBASIC20.18■□□□□ 0.82
COL11A2P13942 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL11A2P13942 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.18■□□□□ 0.82
COL11A2P13942 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.18■□□□□ 0.82
COL11A2P13942 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
COL11A2P13942 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.18■□□□□ 0.82
COL11A2P13942 AC087289.5-201ENST00000586076 3175 ntBASIC20.17■□□□□ 0.82
COL11A2P13942 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.17■□□□□ 0.82
COL11A2P13942 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL11A2P13942 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 AC099548.2-209ENST00000480264 625 ntBASIC20.17■□□□□ 0.82
COL11A2P13942 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.17■□□□□ 0.82
COL11A2P13942 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.17■□□□□ 0.82
COL11A2P13942 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.17■□□□□ 0.82
COL11A2P13942 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.17■□□□□ 0.82
COL11A2P13942 MIR5189-201ENST00000577370 114 ntBASIC20.17■□□□□ 0.82
COL11A2P13942 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.17■□□□□ 0.82
COL11A2P13942 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.17■□□□□ 0.82
COL11A2P13942 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL11A2P13942 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.17■□□□□ 0.82
COL11A2P13942 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms