Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.96■□□□□ 0.14
LAMP1P11279 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
LAMP1P11279 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
LAMP1P11279 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.95■□□□□ 0.14
LAMP1P11279 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
LAMP1P11279 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.95■□□□□ 0.14
LAMP1P11279 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 PCDHA1-201ENST00000378133 2726 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 AC087163.2-201ENST00000457299 853 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 SCARNA2-201ENST00000458748 420 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 AF238378.1-201ENST00000526806 358 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 AC021087.4-201ENST00000563761 564 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.95■□□□□ 0.14
LAMP1P11279 AC025062.2-201ENST00000605477 670 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LAMP1P11279 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 AC002310.6-201ENST00000624451 1377 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 AC006504.4-201ENST00000592118 1568 ntBASIC15.95■□□□□ 0.14
LAMP1P11279 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.95■□□□□ 0.14
LAMP1P11279 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LAMP1P11279 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 PI4KAP1-204ENST00000612579 1703 ntBASIC15.94■□□□□ 0.14
LAMP1P11279 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 AL671710.1-201ENST00000610245 2349 ntBASIC15.94■□□□□ 0.14
LAMP1P11279 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.94■□□□□ 0.14
LAMP1P11279 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.94■□□□□ 0.14
LAMP1P11279 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.94■□□□□ 0.14
LAMP1P11279 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.94■□□□□ 0.14
LAMP1P11279 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 REXO1L3P-201ENST00000622202 1288 ntBASIC15.94■□□□□ 0.14
LAMP1P11279 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.94■□□□□ 0.14
LAMP1P11279 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LAMP1P11279 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LAMP1P11279 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.93■□□□□ 0.14
LAMP1P11279 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LAMP1P11279 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LAMP1P11279 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms