Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 ELL2P1-201ENST00000413990 1906 ntBASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 RHOQP3-201ENST00000437982 621 ntBASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 KRT19P2-202ENST00000557173 1012 ntBASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 AL078644.1-201ENST00000609881 752 ntBASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCNYL3P0C7X3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 AC025580.3-201ENST00000617932 1424 ntBASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 AL590787.1-201ENST00000568856 1315 ntBASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 CNN2P11-201ENST00000429351 262 ntBASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 ACTG1P14-201ENST00000446382 1122 ntBASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 CXCL1P1-201ENST00000502804 216 ntBASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCNYL3P0C7X3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 AL391005.1-201ENST00000623953 2435 ntBASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms