Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.35■□□□□ 0.05
P04436 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.35■□□□□ 0.05
P04436 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
P04436 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.35■□□□□ 0.05
P04436 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
P04436 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.34■□□□□ 0.05
P04436 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
P04436 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
P04436 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
P04436 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
P04436 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
P04436 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.34■□□□□ 0.05
P04436 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 RNU1-129P-201ENST00000384064 167 ntBASIC15.34■□□□□ 0.05
P04436 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.34■□□□□ 0.05
P04436 AL355306.1-201ENST00000415580 579 ntBASIC15.34■□□□□ 0.05
P04436 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.34■□□□□ 0.05
P04436 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 SPDYE11-202ENST00000450699 704 ntBASIC15.34■□□□□ 0.05
P04436 TIMM8BP1-201ENST00000452384 211 ntBASIC15.34■□□□□ 0.05
P04436 AC109635.5-201ENST00000533593 962 ntBASIC15.34■□□□□ 0.05
P04436 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
P04436 SPDYE9P-201ENST00000570642 692 ntBASIC15.34■□□□□ 0.05
P04436 U1.21-201ENST00000580816 167 ntBASIC15.34■□□□□ 0.05
P04436 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.34■□□□□ 0.05
P04436 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.34■□□□□ 0.05
P04436 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 AC004835.2-201ENST00000603762 682 ntBASIC15.34■□□□□ 0.05
P04436 AC026120.1-201ENST00000611536 926 ntBASIC15.34■□□□□ 0.05
P04436 SPDYE10P-202ENST00000612005 668 ntBASIC15.34■□□□□ 0.05
P04436 SPDYE8P-202ENST00000612377 668 ntBASIC15.34■□□□□ 0.05
P04436 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.34■□□□□ 0.05
P04436 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.34■□□□□ 0.05
P04436 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P04436 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
P04436 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.34■□□□□ 0.05
P04436 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.34■□□□□ 0.05
P04436 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
P04436 AC106820.2-201ENST00000563775 3264 ntBASIC15.34■□□□□ 0.05
P04436 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
P04436 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
P04436 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.33■□□□□ 0.05
P04436 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
P04436 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
P04436 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
P04436 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
P04436 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.33■□□□□ 0.04
P04436 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.33■□□□□ 0.04
P04436 RN7SL589P-201ENST00000481268 310 ntBASIC15.33■□□□□ 0.04
P04436 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.33■□□□□ 0.04
P04436 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.33■□□□□ 0.04
P04436 RARRES2P8-201ENST00000566335 367 ntBASIC15.33■□□□□ 0.04
P04436 MIR3909-201ENST00000579518 119 ntBASIC15.33■□□□□ 0.04
P04436 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.33■□□□□ 0.04
P04436 AC099522.2-201ENST00000607001 744 ntBASIC15.33■□□□□ 0.04
P04436 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.33■□□□□ 0.04
P04436 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
P04436 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 AC005332.8-201ENST00000622750 2735 ntBASIC15.33■□□□□ 0.04
P04436 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
P04436 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.33■□□□□ 0.04
P04436 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.33■□□□□ 0.04
P04436 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
P04436 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
P04436 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.33■□□□□ 0.04
P04436 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
P04436 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P04436 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.33■□□□□ 0.04
P04436 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms