Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GAPDHP04406 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 AC091304.2-201ENST00000564639 760 ntBASIC14.14□□□□□ -0.15
GAPDHP04406 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.14□□□□□ -0.15
GAPDHP04406 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 AC099063.4-201ENST00000641099 1602 ntBASIC14.14□□□□□ -0.15
GAPDHP04406 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.13□□□□□ -0.15
GAPDHP04406 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 PMPCAP1-201ENST00000508114 1576 ntBASIC14.13□□□□□ -0.15
GAPDHP04406 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
GAPDHP04406 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GAPDHP04406 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 AC023824.1-201ENST00000562945 2975 ntBASIC14.13□□□□□ -0.15
GAPDHP04406 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.13□□□□□ -0.15
GAPDHP04406 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.13□□□□□ -0.15
GAPDHP04406 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.13□□□□□ -0.15
GAPDHP04406 AP000867.4-201ENST00000641616 219 ntBASIC14.13□□□□□ -0.15
GAPDHP04406 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GAPDHP04406 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GAPDHP04406 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
GAPDHP04406 AC009336.1-201ENST00000608941 1553 ntBASIC14.13□□□□□ -0.15
GAPDHP04406 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GAPDHP04406 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.13□□□□□ -0.15
GAPDHP04406 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GAPDHP04406 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.12□□□□□ -0.15
GAPDHP04406 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 AL662844.4-201ENST00000606367 2838 ntBASIC14.12□□□□□ -0.15
GAPDHP04406 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GAPDHP04406 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.12□□□□□ -0.15
GAPDHP04406 AC092384.3-202ENST00000564646 2873 ntBASIC14.12□□□□□ -0.15
GAPDHP04406 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
GAPDHP04406 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms