Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 SPDYE17-201ENST00000412399 783 ntBASIC19.38■□□□□ 0.69
COL2A1P02458 HLA-V-201ENST00000429037 534 ntBASIC19.38■□□□□ 0.69
COL2A1P02458 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.38■□□□□ 0.69
COL2A1P02458 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL2A1P02458 AL512361.1-201ENST00000554200 418 ntBASIC19.38■□□□□ 0.69
COL2A1P02458 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
COL2A1P02458 AL358472.5-202ENST00000641448 1267 ntBASIC19.38■□□□□ 0.69
COL2A1P02458 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.38■□□□□ 0.69
COL2A1P02458 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.38■□□□□ 0.69
COL2A1P02458 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.38■□□□□ 0.69
COL2A1P02458 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
COL2A1P02458 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.38■□□□□ 0.69
COL2A1P02458 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL2A1P02458 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
COL2A1P02458 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL2A1P02458 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL2A1P02458 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 AL662799.1-202ENST00000614205 422 ntBASIC19.37■□□□□ 0.69
COL2A1P02458 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.37■□□□□ 0.69
COL2A1P02458 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL2A1P02458 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
COL2A1P02458 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.37■□□□□ 0.69
COL2A1P02458 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
COL2A1P02458 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL2A1P02458 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.37■□□□□ 0.69
COL2A1P02458 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.36■□□□□ 0.69
COL2A1P02458 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.36■□□□□ 0.69
COL2A1P02458 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 MEIS3P1-201ENST00000495167 958 ntBASIC19.36■□□□□ 0.69
COL2A1P02458 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.36■□□□□ 0.69
COL2A1P02458 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.36■□□□□ 0.69
COL2A1P02458 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL2A1P02458 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.36■□□□□ 0.69
COL2A1P02458 KRT8P12-202ENST00000472924 1397 ntBASIC19.36■□□□□ 0.69
COL2A1P02458 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.36■□□□□ 0.69
COL2A1P02458 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
COL2A1P02458 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.36■□□□□ 0.69
COL2A1P02458 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
COL2A1P02458 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.35■□□□□ 0.69
COL2A1P02458 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 COX5BP8-201ENST00000416911 349 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.35■□□□□ 0.69
COL2A1P02458 AC027307.3-201ENST00000594262 1100 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 AC026979.3-201ENST00000607315 403 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 AC004790.1-201ENST00000612686 536 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.35■□□□□ 0.69
COL2A1P02458 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL2A1P02458 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL2A1P02458 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL2A1P02458 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL2A1P02458 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.35■□□□□ 0.69
COL2A1P02458 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL2A1P02458 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms