Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AC068137.2-201ENST00000605408 478 ntBASIC16.83■□□□□ 0.28
TRBC1P01850 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBC1P01850 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBC1P01850 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBC1P01850 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBC1P01850 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRBC1P01850 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBC1P01850 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBC1P01850 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBC1P01850 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBC1P01850 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBC1P01850 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBC1P01850 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 AL603756.1-201ENST00000606511 2163 ntBASIC16.82■□□□□ 0.28
TRBC1P01850 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TRBC1P01850 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRBC1P01850 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBC1P01850 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TRBC1P01850 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 RNU1-129P-201ENST00000384064 167 ntBASIC16.82■□□□□ 0.28
TRBC1P01850 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBC1P01850 AC140658.5-201ENST00000438532 169 ntBASIC16.82■□□□□ 0.28
TRBC1P01850 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBC1P01850 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.82■□□□□ 0.28
TRBC1P01850 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRBC1P01850 U1.21-201ENST00000580816 167 ntBASIC16.82■□□□□ 0.28
TRBC1P01850 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBC1P01850 AL671710.1-201ENST00000610245 2349 ntBASIC16.82■□□□□ 0.28
TRBC1P01850 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
TRBC1P01850 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBC1P01850 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBC1P01850 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 AC092919.2-201ENST00000623631 1645 ntBASIC16.81■□□□□ 0.28
TRBC1P01850 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.81■□□□□ 0.28
TRBC1P01850 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 YBX2P1-201ENST00000394192 760 ntBASIC16.81■□□□□ 0.28
TRBC1P01850 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.81■□□□□ 0.28
TRBC1P01850 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 MTDHP5-201ENST00000598980 586 ntBASIC16.81■□□□□ 0.28
TRBC1P01850 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBC1P01850 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBC1P01850 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBC1P01850 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRBC1P01850 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRBC1P01850 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBC1P01850 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBC1P01850 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 PCDHA12-202ENST00000613593 2588 ntBASIC16.8■□□□□ 0.28
TRBC1P01850 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBC1P01850 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms