Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 BRWD1P1-201ENST00000401091 371 ntBASIC18.96■□□□□ 0.63
ALDH1A1P00352 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 AL355994.2-201ENST00000447882 704 ntBASIC18.96■□□□□ 0.63
ALDH1A1P00352 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
ALDH1A1P00352 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ALDH1A1P00352 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 AC092337.1-201ENST00000568699 1129 ntBASIC18.95■□□□□ 0.62
ALDH1A1P00352 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ALDH1A1P00352 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ALDH1A1P00352 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.95■□□□□ 0.62
ALDH1A1P00352 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 AC010319.3-201ENST00000597028 470 ntBASIC18.94■□□□□ 0.62
ALDH1A1P00352 AC233724.13-201ENST00000598383 410 ntBASIC18.94■□□□□ 0.62
ALDH1A1P00352 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALDH1A1P00352 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ALDH1A1P00352 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms