Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD3O95983 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD3O95983 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD3O95983 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD3O95983 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 AC022532.1-201ENST00000624563 1728 ntBASIC19.34■□□□□ 0.69
MBD3O95983 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3O95983 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
MBD3O95983 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
MBD3O95983 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3O95983 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3O95983 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3O95983 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.33■□□□□ 0.69
MBD3O95983 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3O95983 AC144831.1-201ENST00000573312 2656 ntBASIC19.33■□□□□ 0.69
MBD3O95983 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.33■□□□□ 0.69
MBD3O95983 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3O95983 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3O95983 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3O95983 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.33■□□□□ 0.68
MBD3O95983 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MBD3O95983 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3O95983 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3O95983 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD3O95983 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3O95983 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD3O95983 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3O95983 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3O95983 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD3O95983 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3O95983 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MBD3O95983 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD3O95983 DBET-201ENST00000630918 3363 ntBASIC19.32■□□□□ 0.68
MBD3O95983 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD3O95983 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD3O95983 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.32■□□□□ 0.68
MBD3O95983 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.32■□□□□ 0.68
MBD3O95983 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
MBD3O95983 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.32■□□□□ 0.68
MBD3O95983 AC073592.5-201ENST00000624854 528 ntBASIC19.32■□□□□ 0.68
MBD3O95983 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD3O95983 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.32■□□□□ 0.68
MBD3O95983 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.32■□□□□ 0.68
MBD3O95983 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3O95983 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3O95983 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD3O95983 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD3O95983 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD3O95983 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD3O95983 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 LIN28AP1-201ENST00000429574 405 ntBASIC19.31■□□□□ 0.68
MBD3O95983 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD3O95983 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD3O95983 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 AP005117.1-202ENST00000581724 1908 ntBASIC19.31■□□□□ 0.68
MBD3O95983 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms