Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.13□□□□□ -0.15
ABCA1O95477 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ABCA1O95477 AL513480.1-201ENST00000451731 511 ntBASIC14.13□□□□□ -0.15
ABCA1O95477 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ABCA1O95477 AL512356.2-201ENST00000546955 174 ntBASIC14.13□□□□□ -0.15
ABCA1O95477 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 AC116407.2-201ENST00000613639 860 ntBASIC14.13□□□□□ -0.15
ABCA1O95477 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
ABCA1O95477 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ABCA1O95477 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ABCA1O95477 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA1O95477 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
ABCA1O95477 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA1O95477 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.13□□□□□ -0.15
ABCA1O95477 AC005237.2-201ENST00000434368 219 ntBASIC14.13□□□□□ -0.15
ABCA1O95477 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA1O95477 AC243562.1-201ENST00000560672 389 ntBASIC14.13□□□□□ -0.15
ABCA1O95477 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA1O95477 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA1O95477 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA1O95477 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ABCA1O95477 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
ABCA1O95477 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA1O95477 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA1O95477 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA1O95477 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCA1O95477 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.12□□□□□ -0.15
ABCA1O95477 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.12□□□□□ -0.15
ABCA1O95477 AC140658.5-201ENST00000438532 169 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 GAPDHP21-201ENST00000450301 1010 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
ABCA1O95477 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ABCA1O95477 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCA1O95477 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 CNN2P2-201ENST00000443536 909 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 CNN2P3-201ENST00000450201 906 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 UGT1A2P-201ENST00000454886 866 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 FAM86C2P-203ENST00000528684 1004 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.12□□□□□ -0.15
ABCA1O95477 AL136317.3-201ENST00000618497 906 ntBASIC14.12□□□□□ -0.15
ABCA1O95477 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
ABCA1O95477 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCA1O95477 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA1O95477 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCA1O95477 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
ABCA1O95477 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ABCA1O95477 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms