Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG5O95196 ABALON-201ENST00000629058 1903 ntBASIC18.06■□□□□ 0.48
CSPG5O95196 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CSPG5O95196 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.05■□□□□ 0.48
CSPG5O95196 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
CSPG5O95196 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 AKAP8P1-201ENST00000434743 1349 ntBASIC18.05■□□□□ 0.48
CSPG5O95196 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.05■□□□□ 0.48
CSPG5O95196 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.05■□□□□ 0.48
CSPG5O95196 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 AL512356.2-201ENST00000546955 174 ntBASIC18.05■□□□□ 0.48
CSPG5O95196 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.05■□□□□ 0.48
CSPG5O95196 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CSPG5O95196 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CSPG5O95196 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CSPG5O95196 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CSPG5O95196 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CSPG5O95196 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG5O95196 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CSPG5O95196 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 FLJ13224-201ENST00000313737 1514 ntBASIC18.04■□□□□ 0.48
CSPG5O95196 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.04■□□□□ 0.48
CSPG5O95196 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.04■□□□□ 0.48
CSPG5O95196 SPDYE7P-202ENST00000420373 878 ntBASIC18.04■□□□□ 0.48
CSPG5O95196 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CSPG5O95196 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 MIR4453-201ENST00000584019 89 ntBASIC18.04■□□□□ 0.48
CSPG5O95196 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CSPG5O95196 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.04■□□□□ 0.48
CSPG5O95196 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.04■□□□□ 0.48
CSPG5O95196 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG5O95196 LYSMD4-203ENST00000378904 2122 ntBASIC18.04■□□□□ 0.48
CSPG5O95196 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.04■□□□□ 0.48
CSPG5O95196 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.03■□□□□ 0.48
CSPG5O95196 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.03■□□□□ 0.48
CSPG5O95196 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.03■□□□□ 0.48
CSPG5O95196 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CSPG5O95196 GAPDHP21-201ENST00000450301 1010 ntBASIC18.03■□□□□ 0.48
CSPG5O95196 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.03■□□□□ 0.48
CSPG5O95196 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CSPG5O95196 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.03■□□□□ 0.48
CSPG5O95196 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.03■□□□□ 0.48
CSPG5O95196 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.03■□□□□ 0.48
CSPG5O95196 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CSPG5O95196 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG5O95196 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CSPG5O95196 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.02■□□□□ 0.48
CSPG5O95196 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CSPG5O95196 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms