Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
HCN1O60741 TERC-201ENST00000602385 541 ntBASIC15.79■□□□□ 0.12
HCN1O60741 AL356488.2-201ENST00000602755 427 ntBASIC15.79■□□□□ 0.12
HCN1O60741 AC027601.4-201ENST00000611259 610 ntBASIC15.79■□□□□ 0.12
HCN1O60741 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 AL513477.1-201ENST00000602865 2407 ntBASIC15.79■□□□□ 0.12
HCN1O60741 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCN1O60741 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.79■□□□□ 0.12
HCN1O60741 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 AC004817.3-201ENST00000602957 2129 ntBASIC15.79■□□□□ 0.12
HCN1O60741 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HCN1O60741 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.78■□□□□ 0.12
HCN1O60741 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 PMS2P7-201ENST00000506558 1336 ntBASIC15.78■□□□□ 0.12
HCN1O60741 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.78■□□□□ 0.12
HCN1O60741 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HCN1O60741 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 AC136632.2-201ENST00000512891 861 ntBASIC15.78■□□□□ 0.12
HCN1O60741 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.78■□□□□ 0.12
HCN1O60741 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.78■□□□□ 0.12
HCN1O60741 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.78■□□□□ 0.12
HCN1O60741 FAM197Y3-203ENST00000618346 717 ntBASIC15.78■□□□□ 0.12
HCN1O60741 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.78■□□□□ 0.12
HCN1O60741 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.78■□□□□ 0.12
HCN1O60741 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
HCN1O60741 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.78■□□□□ 0.12
HCN1O60741 PCDHA14-201ENST00000506751 2298 ntBASIC15.78■□□□□ 0.12
HCN1O60741 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HCN1O60741 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 AP002414.3-201ENST00000589352 1468 ntBASIC15.78■□□□□ 0.12
HCN1O60741 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCN1O60741 AC046185.3-201ENST00000623228 1824 ntBASIC15.78■□□□□ 0.12
HCN1O60741 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
HCN1O60741 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HCN1O60741 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.77■□□□□ 0.12
HCN1O60741 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HCN1O60741 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.77■□□□□ 0.12
HCN1O60741 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.77■□□□□ 0.12
HCN1O60741 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.77■□□□□ 0.12
HCN1O60741 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.77■□□□□ 0.12
HCN1O60741 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.77■□□□□ 0.12
HCN1O60741 UNC93B6-202ENST00000528242 690 ntBASIC15.77■□□□□ 0.12
HCN1O60741 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.77■□□□□ 0.12
HCN1O60741 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.77■□□□□ 0.12
HCN1O60741 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.77■□□□□ 0.12
HCN1O60741 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.77■□□□□ 0.12
HCN1O60741 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.77■□□□□ 0.12
HCN1O60741 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 AC004706.3-202ENST00000621574 984 ntBASIC15.77■□□□□ 0.12
HCN1O60741 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCN1O60741 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms