Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHL41O60662 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHL41O60662 RPS2P28-201ENST00000314255 741 ntBASIC16.77■□□□□ 0.28
KLHL41O60662 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KLHL41O60662 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.77■□□□□ 0.28
KLHL41O60662 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.77■□□□□ 0.28
KLHL41O60662 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHL41O60662 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
KLHL41O60662 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.77■□□□□ 0.28
KLHL41O60662 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHL41O60662 IGHV3-52-201ENST00000519770 353 ntBASIC16.77■□□□□ 0.28
KLHL41O60662 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHL41O60662 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.77■□□□□ 0.28
KLHL41O60662 AC109462.3-201ENST00000573934 613 ntBASIC16.77■□□□□ 0.28
KLHL41O60662 AC019129.2-201ENST00000609837 1235 ntBASIC16.77■□□□□ 0.28
KLHL41O60662 AL773604.1-201ENST00000617417 272 ntBASIC16.77■□□□□ 0.28
KLHL41O60662 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHL41O60662 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHL41O60662 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KLHL41O60662 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.77■□□□□ 0.27
KLHL41O60662 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
KLHL41O60662 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
KLHL41O60662 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.77■□□□□ 0.27
KLHL41O60662 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHL41O60662 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
KLHL41O60662 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.77■□□□□ 0.27
KLHL41O60662 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KLHL41O60662 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.77■□□□□ 0.27
KLHL41O60662 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHL41O60662 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHL41O60662 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.77■□□□□ 0.27
KLHL41O60662 PAUPAR-201ENST00000630360 2965 ntBASIC16.77■□□□□ 0.27
KLHL41O60662 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.77■□□□□ 0.27
KLHL41O60662 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KLHL41O60662 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.27
KLHL41O60662 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.76■□□□□ 0.27
KLHL41O60662 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 AL513523.2-202ENST00000427283 2040 ntBASIC16.76■□□□□ 0.27
KLHL41O60662 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 SCARNA2-201ENST00000458748 420 ntBASIC16.76■□□□□ 0.27
KLHL41O60662 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
KLHL41O60662 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.76■□□□□ 0.27
KLHL41O60662 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
KLHL41O60662 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHL41O60662 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
KLHL41O60662 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KLHL41O60662 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.75■□□□□ 0.27
KLHL41O60662 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KLHL41O60662 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.75■□□□□ 0.27
KLHL41O60662 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
KLHL41O60662 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KLHL41O60662 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KLHL41O60662 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.75■□□□□ 0.27
KLHL41O60662 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.75■□□□□ 0.27
KLHL41O60662 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KLHL41O60662 RBM17P3-201ENST00000417687 1192 ntBASIC16.75■□□□□ 0.27
KLHL41O60662 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KLHL41O60662 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.75■□□□□ 0.27
KLHL41O60662 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.75■□□□□ 0.27
KLHL41O60662 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms