Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA2O43364 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HOXA2O43364 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.87■□□□□ 0.45
HOXA2O43364 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.87■□□□□ 0.45
HOXA2O43364 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 TSSK5P-201ENST00000423978 907 ntBASIC17.87■□□□□ 0.45
HOXA2O43364 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.87■□□□□ 0.45
HOXA2O43364 CRB3P1-201ENST00000449338 276 ntBASIC17.87■□□□□ 0.45
HOXA2O43364 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 AP002490.2-201ENST00000524791 560 ntBASIC17.87■□□□□ 0.45
HOXA2O43364 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HOXA2O43364 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 KRT8P39-201ENST00000396270 1433 ntBASIC17.87■□□□□ 0.45
HOXA2O43364 RNF165-205ENST00000588679 2904 ntBASIC17.87■□□□□ 0.45
HOXA2O43364 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.87■□□□□ 0.45
HOXA2O43364 FOXO1B-201ENST00000504678 1527 ntBASIC17.87■□□□□ 0.45
HOXA2O43364 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HOXA2O43364 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXA2O43364 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXA2O43364 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXA2O43364 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXA2O43364 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 PIN1P1-201ENST00000412108 996 ntBASIC17.86■□□□□ 0.45
HOXA2O43364 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.86■□□□□ 0.45
HOXA2O43364 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 SERBP1P5-201ENST00000510079 1181 ntBASIC17.86■□□□□ 0.45
HOXA2O43364 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.86■□□□□ 0.45
HOXA2O43364 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXA2O43364 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.86■□□□□ 0.45
HOXA2O43364 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HOXA2O43364 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXA2O43364 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
HOXA2O43364 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.86■□□□□ 0.45
HOXA2O43364 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXA2O43364 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXA2O43364 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXA2O43364 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 CETN4P-206ENST00000642099 2168 ntBASIC17.86■□□□□ 0.45
HOXA2O43364 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXA2O43364 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXA2O43364 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HOXA2O43364 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXA2O43364 PKD1P1-201ENST00000458669 6805 ntBASIC17.85■□□□□ 0.45
HOXA2O43364 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXA2O43364 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXA2O43364 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXA2O43364 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.85■□□□□ 0.45
HOXA2O43364 CROCCP2-202ENST00000412962 2773 ntBASIC17.85■□□□□ 0.45
HOXA2O43364 MRPS18AP1-201ENST00000414458 589 ntBASIC17.85■□□□□ 0.45
HOXA2O43364 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HOXA2O43364 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXA2O43364 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXA2O43364 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXA2O43364 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.85■□□□□ 0.45
HOXA2O43364 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HOXA2O43364 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
HOXA2O43364 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.85■□□□□ 0.45
HOXA2O43364 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HOXA2O43364 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HOXA2O43364 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HOXA2O43364 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXA2O43364 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXA2O43364 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HOXA2O43364 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HOXA2O43364 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXA2O43364 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms