Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.13■□□□□ 0.81
SEMA3EO15041 AC140878.1-201ENST00000565277 250 ntBASIC20.13■□□□□ 0.81
SEMA3EO15041 AL096865.1-201ENST00000606796 927 ntBASIC20.13■□□□□ 0.81
SEMA3EO15041 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.13■□□□□ 0.81
SEMA3EO15041 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SEMA3EO15041 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.13■□□□□ 0.81
SEMA3EO15041 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 HCG11-201ENST00000411553 5696 ntBASIC20.13■□□□□ 0.81
SEMA3EO15041 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SEMA3EO15041 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
SEMA3EO15041 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.12■□□□□ 0.81
SEMA3EO15041 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SEMA3EO15041 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.12■□□□□ 0.81
SEMA3EO15041 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.12■□□□□ 0.81
SEMA3EO15041 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SEMA3EO15041 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.12■□□□□ 0.81
SEMA3EO15041 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.12■□□□□ 0.81
SEMA3EO15041 AC125807.1-201ENST00000483097 614 ntBASIC20.12■□□□□ 0.81
SEMA3EO15041 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.12■□□□□ 0.81
SEMA3EO15041 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.12■□□□□ 0.81
SEMA3EO15041 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.12■□□□□ 0.81
SEMA3EO15041 AL390955.2-201ENST00000603032 514 ntBASIC20.12■□□□□ 0.81
SEMA3EO15041 AL645728.1-201ENST00000366221 2101 ntBASIC20.12■□□□□ 0.81
SEMA3EO15041 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SEMA3EO15041 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SEMA3EO15041 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SEMA3EO15041 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SEMA3EO15041 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEMA3EO15041 FOXO1B-201ENST00000504678 1527 ntBASIC20.12■□□□□ 0.81
SEMA3EO15041 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 AC073439.1-201ENST00000624121 1774 ntBASIC20.11■□□□□ 0.81
SEMA3EO15041 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SEMA3EO15041 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.11■□□□□ 0.81
SEMA3EO15041 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SEMA3EO15041 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.11■□□□□ 0.81
SEMA3EO15041 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.11■□□□□ 0.81
SEMA3EO15041 AL645608.8-201ENST00000606034 2086 ntBASIC20.11■□□□□ 0.81
SEMA3EO15041 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.11■□□□□ 0.81
SEMA3EO15041 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 AC060834.1-201ENST00000443027 2032 ntBASIC20.11■□□□□ 0.81
SEMA3EO15041 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SEMA3EO15041 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SEMA3EO15041 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.11■□□□□ 0.81
SEMA3EO15041 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SEMA3EO15041 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SEMA3EO15041 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.11■□□□□ 0.81
SEMA3EO15041 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.11■□□□□ 0.81
SEMA3EO15041 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.11■□□□□ 0.81
SEMA3EO15041 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.11■□□□□ 0.81
SEMA3EO15041 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.11■□□□□ 0.81
SEMA3EO15041 RARRES2P9-201ENST00000565168 469 ntBASIC20.11■□□□□ 0.81
SEMA3EO15041 MIR3197-201ENST00000582241 73 ntBASIC20.11■□□□□ 0.81
SEMA3EO15041 MIR6080-201ENST00000617359 66 ntBASIC20.11■□□□□ 0.81
SEMA3EO15041 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.11■□□□□ 0.81
SEMA3EO15041 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SEMA3EO15041 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SEMA3EO15041 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SEMA3EO15041 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.11■□□□□ 0.81
SEMA3EO15041 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.1■□□□□ 0.81
SEMA3EO15041 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms