Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 OR6D1P-203ENST00000641209 4860 ntBASIC18■□□□□ 0.47
FOXN3O00409 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 AL031284.1-201ENST00000419297 478 ntBASIC18■□□□□ 0.47
FOXN3O00409 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 RNA5SP419-201ENST00000515908 135 ntBASIC18■□□□□ 0.47
FOXN3O00409 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18■□□□□ 0.47
FOXN3O00409 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18■□□□□ 0.47
FOXN3O00409 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18■□□□□ 0.47
FOXN3O00409 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 BSG-214ENST00000614867 960 ntTSL 3 BASIC18■□□□□ 0.47
FOXN3O00409 AL773604.1-201ENST00000617417 272 ntBASIC18■□□□□ 0.47
FOXN3O00409 AC117500.6-201ENST00000624871 588 ntBASIC18■□□□□ 0.47
FOXN3O00409 AC005593.1-201ENST00000624894 515 ntBASIC18■□□□□ 0.47
FOXN3O00409 PGM5P2-202ENST00000637225 1043 ntBASIC18■□□□□ 0.47
FOXN3O00409 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18■□□□□ 0.47
FOXN3O00409 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 AL353732.1-201ENST00000569618 1459 ntBASIC18■□□□□ 0.47
FOXN3O00409 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 DOC2GP-204ENST00000639052 2548 ntBASIC18■□□□□ 0.47
FOXN3O00409 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
FOXN3O00409 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN3O00409 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXN3O00409 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN3O00409 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 KRT8P39-201ENST00000396270 1433 ntBASIC17.99■□□□□ 0.47
FOXN3O00409 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FOXN3O00409 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
FOXN3O00409 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 ME2P1-201ENST00000426028 1970 ntBASIC17.99■□□□□ 0.47
FOXN3O00409 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FOXN3O00409 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN3O00409 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FOXN3O00409 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXN3O00409 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN3O00409 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN3O00409 AC108073.2-201ENST00000464002 357 ntBASIC17.99■□□□□ 0.47
FOXN3O00409 AC092910.1-201ENST00000482027 1129 ntBASIC17.99■□□□□ 0.47
FOXN3O00409 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXN3O00409 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
FOXN3O00409 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FOXN3O00409 MIR7706-201ENST00000613747 67 ntBASIC17.99■□□□□ 0.47
FOXN3O00409 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN3O00409 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.99■□□□□ 0.47
FOXN3O00409 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN3O00409 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FOXN3O00409 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN3O00409 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
FOXN3O00409 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
FOXN3O00409 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXN3O00409 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN3O00409 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXN3O00409 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN3O00409 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
FOXN3O00409 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN3O00409 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
FOXN3O00409 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN3O00409 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXN3O00409 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXN3O00409 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN3O00409 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXN3O00409 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
FOXN3O00409 CYP2A7P1-201ENST00000595391 815 ntBASIC17.98■□□□□ 0.47
FOXN3O00409 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms