Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
O00370 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
O00370 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 AL645728.1-201ENST00000366221 2101 ntBASIC17.94■□□□□ 0.46
O00370 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
O00370 CRYGEP-201ENST00000412192 528 ntBASIC17.94■□□□□ 0.46
O00370 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.94■□□□□ 0.46
O00370 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.94■□□□□ 0.46
O00370 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.94■□□□□ 0.46
O00370 FAM185BP-201ENST00000443595 716 ntBASIC17.94■□□□□ 0.46
O00370 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.94■□□□□ 0.46
O00370 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.94■□□□□ 0.46
O00370 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
O00370 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
O00370 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
O00370 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
O00370 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.93■□□□□ 0.46
O00370 ZNF259P1-201ENST00000407656 1365 ntBASIC17.93■□□□□ 0.46
O00370 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
O00370 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.93■□□□□ 0.46
O00370 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
O00370 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.93■□□□□ 0.46
O00370 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.93■□□□□ 0.46
O00370 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.93■□□□□ 0.46
O00370 AC091167.2-201ENST00000579581 588 ntBASIC17.93■□□□□ 0.46
O00370 MPDU1-223ENST00000582151 728 ntBASIC17.93■□□□□ 0.46
O00370 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.93■□□□□ 0.46
O00370 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
O00370 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.93■□□□□ 0.46
O00370 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.93■□□□□ 0.46
O00370 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 SLC22A20-204ENST00000530038 1673 ntBASIC17.93■□□□□ 0.46
O00370 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.93■□□□□ 0.46
O00370 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.93■□□□□ 0.46
O00370 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
O00370 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.92■□□□□ 0.46
O00370 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.92■□□□□ 0.46
O00370 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.92■□□□□ 0.46
O00370 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
O00370 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
O00370 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
O00370 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 LINC00895-201ENST00000629028 1637 ntBASIC17.92■□□□□ 0.46
O00370 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
O00370 AL022342.1-201ENST00000400363 863 ntBASIC17.92■□□□□ 0.46
O00370 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.92■□□□□ 0.46
O00370 CXCL1P1-201ENST00000502804 216 ntBASIC17.92■□□□□ 0.46
O00370 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.92■□□□□ 0.46
O00370 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.92■□□□□ 0.46
O00370 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.92■□□□□ 0.46
O00370 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.92■□□□□ 0.46
O00370 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
O00370 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.92■□□□□ 0.46
O00370 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.92■□□□□ 0.46
O00370 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.92■□□□□ 0.46
O00370 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms