Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.96■□□□□ 0.15
UPK1AO00322 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.96■□□□□ 0.15
UPK1AO00322 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.96■□□□□ 0.15
UPK1AO00322 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
UPK1AO00322 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UPK1AO00322 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
UPK1AO00322 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1AO00322 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.96■□□□□ 0.14
UPK1AO00322 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1AO00322 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1AO00322 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.96■□□□□ 0.14
UPK1AO00322 MTHFR-217ENST00000641820 1569 ntBASIC15.96■□□□□ 0.14
UPK1AO00322 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
UPK1AO00322 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
UPK1AO00322 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.95■□□□□ 0.14
UPK1AO00322 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.95■□□□□ 0.14
UPK1AO00322 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.95■□□□□ 0.14
UPK1AO00322 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.95■□□□□ 0.14
UPK1AO00322 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.95■□□□□ 0.14
UPK1AO00322 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.95■□□□□ 0.14
UPK1AO00322 DUX4L17-201ENST00000557360 1267 ntBASIC15.95■□□□□ 0.14
UPK1AO00322 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.95■□□□□ 0.14
UPK1AO00322 AC243591.1-201ENST00000452967 1364 ntBASIC15.95■□□□□ 0.14
UPK1AO00322 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.95■□□□□ 0.14
UPK1AO00322 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.95■□□□□ 0.14
UPK1AO00322 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UPK1AO00322 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
UPK1AO00322 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.94■□□□□ 0.14
UPK1AO00322 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
UPK1AO00322 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1AO00322 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.94■□□□□ 0.14
UPK1AO00322 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1AO00322 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.94■□□□□ 0.14
UPK1AO00322 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.94■□□□□ 0.14
UPK1AO00322 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms