Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
CDC7O00311 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC7O00311 AP002414.3-201ENST00000589352 1468 ntBASIC16.52■□□□□ 0.23
CDC7O00311 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDC7O00311 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC7O00311 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.52■□□□□ 0.23
CDC7O00311 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDC7O00311 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.52■□□□□ 0.23
CDC7O00311 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CDC7O00311 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDC7O00311 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CDC7O00311 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDC7O00311 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.51■□□□□ 0.23
CDC7O00311 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 AL671710.1-201ENST00000610245 2349 ntBASIC16.51■□□□□ 0.23
CDC7O00311 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDC7O00311 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.51■□□□□ 0.23
CDC7O00311 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.51■□□□□ 0.23
CDC7O00311 AC018712.1-201ENST00000455767 687 ntBASIC16.51■□□□□ 0.23
CDC7O00311 AC136632.2-201ENST00000512891 861 ntBASIC16.51■□□□□ 0.23
CDC7O00311 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.51■□□□□ 0.23
CDC7O00311 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.51■□□□□ 0.23
CDC7O00311 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 AC008735.5-201ENST00000623544 497 ntBASIC16.51■□□□□ 0.23
CDC7O00311 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.51■□□□□ 0.23
CDC7O00311 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDC7O00311 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.51■□□□□ 0.23
CDC7O00311 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDC7O00311 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 SLC22A20-204ENST00000530038 1673 ntBASIC16.5■□□□□ 0.23
CDC7O00311 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDC7O00311 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC7O00311 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 PMS2P1-201ENST00000431037 1228 ntBASIC16.5■□□□□ 0.23
CDC7O00311 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 AC107918.2-201ENST00000530817 355 ntBASIC16.5■□□□□ 0.23
CDC7O00311 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.5■□□□□ 0.23
CDC7O00311 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC7O00311 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC7O00311 AL139011.1-202ENST00000642063 584 ntBASIC16.5■□□□□ 0.23
CDC7O00311 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDC7O00311 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDC7O00311 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC7O00311 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.5■□□□□ 0.23
CDC7O00311 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDC7O00311 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CDC7O00311 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CDC7O00311 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CDC7O00311 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDC7O00311 KRT18P67-201ENST00000432816 1264 ntBASIC16.49■□□□□ 0.23
CDC7O00311 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDC7O00311 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms