Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX39AO00148 AC080080.1-201ENST00000625121 2420 ntBASIC18.9■□□□□ 0.62
DDX39AO00148 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX39AO00148 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.89■□□□□ 0.62
DDX39AO00148 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DDX39AO00148 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.89■□□□□ 0.62
DDX39AO00148 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
DDX39AO00148 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.89■□□□□ 0.62
DDX39AO00148 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
DDX39AO00148 AL671710.1-201ENST00000610245 2349 ntBASIC18.89■□□□□ 0.61
DDX39AO00148 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX39AO00148 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 RNU1-129P-201ENST00000384064 167 ntBASIC18.89■□□□□ 0.61
DDX39AO00148 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
DDX39AO00148 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.89■□□□□ 0.61
DDX39AO00148 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
DDX39AO00148 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.89■□□□□ 0.61
DDX39AO00148 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DDX39AO00148 U1.21-201ENST00000580816 167 ntBASIC18.89■□□□□ 0.61
DDX39AO00148 MIR4492-201ENST00000581627 80 ntBASIC18.89■□□□□ 0.61
DDX39AO00148 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX39AO00148 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX39AO00148 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX39AO00148 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
DDX39AO00148 AC005915.1-201ENST00000624912 2018 ntBASIC18.89■□□□□ 0.61
DDX39AO00148 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
DDX39AO00148 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX39AO00148 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DDX39AO00148 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX39AO00148 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX39AO00148 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX39AO00148 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 ADH5P3-201ENST00000433842 1137 ntBASIC18.88■□□□□ 0.61
DDX39AO00148 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX39AO00148 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.88■□□□□ 0.61
DDX39AO00148 KRT8P48-201ENST00000515599 1220 ntBASIC18.88■□□□□ 0.61
DDX39AO00148 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
DDX39AO00148 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX39AO00148 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX39AO00148 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
DDX39AO00148 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX39AO00148 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
DDX39AO00148 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
DDX39AO00148 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX39AO00148 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX39AO00148 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX39AO00148 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDX39AO00148 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
DDX39AO00148 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDX39AO00148 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX39AO00148 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
DDX39AO00148 AC004461.1-201ENST00000412461 403 ntBASIC18.87■□□□□ 0.61
DDX39AO00148 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX39AO00148 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.87■□□□□ 0.61
DDX39AO00148 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX39AO00148 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.87■□□□□ 0.61
DDX39AO00148 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX39AO00148 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms