Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 AC005332.1-201ENST00000577698 1310 ntBASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM49D1C9J1S8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 RCN1P1-201ENST00000400413 996 ntBASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AL031133.1-201ENST00000406807 723 ntBASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 KRT17P6-201ENST00000453795 1220 ntBASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AL121956.5-201ENST00000625261 221 ntBASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM49D1C9J1S8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM49D1C9J1S8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM49D1C9J1S8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.89■□□□□ 0.3
TRIM49D1C9J1S8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM49D1C9J1S8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM49D1C9J1S8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM49D1C9J1S8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.89■□□□□ 0.3
TRIM49D1C9J1S8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 AC006277.1-201ENST00000624348 1610 ntBASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 AC024909.3-201ENST00000611513 2257 ntBASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 DRAXINP1-201ENST00000437611 948 ntBASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TOB2P1-201ENST00000469761 992 ntBASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TPSP2-201ENST00000561760 610 ntBASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms