Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HFM1A2PYH4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC24.62■■□□□ 1.53
HFM1A2PYH4 PCGF3-213ENST00000620529 1899 ntBASIC24.62■■□□□ 1.53
HFM1A2PYH4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HFM1A2PYH4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HFM1A2PYH4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 FAM8A3P-201ENST00000427218 844 ntBASIC24.61■■□□□ 1.53
HFM1A2PYH4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 BANF1P1-201ENST00000553684 263 ntBASIC24.61■■□□□ 1.53
HFM1A2PYH4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 HLA-H-201ENST00000383620 1096 ntBASIC24.61■■□□□ 1.53
HFM1A2PYH4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HFM1A2PYH4 AC025678.2-201ENST00000562061 970 ntBASIC24.61■■□□□ 1.53
HFM1A2PYH4 AC106028.4-201ENST00000614509 607 ntBASIC24.61■■□□□ 1.53
HFM1A2PYH4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC24.61■■□□□ 1.53
HFM1A2PYH4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 AC012313.1-201ENST00000593393 3059 ntBASIC24.6■■□□□ 1.53
HFM1A2PYH4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HFM1A2PYH4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
HFM1A2PYH4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HFM1A2PYH4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
HFM1A2PYH4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
HFM1A2PYH4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HFM1A2PYH4 AC008677.1-201ENST00000519230 1561 ntBASIC24.6■■□□□ 1.53
HFM1A2PYH4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 AL390955.2-201ENST00000603032 514 ntBASIC24.6■■□□□ 1.53
HFM1A2PYH4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC24.6■■□□□ 1.53
HFM1A2PYH4 MIR6080-201ENST00000617359 66 ntBASIC24.6■■□□□ 1.53
HFM1A2PYH4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HFM1A2PYH4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 PPP6R2P1-201ENST00000450880 1275 ntBASIC24.59■■□□□ 1.53
HFM1A2PYH4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 SPCS2P1-201ENST00000561636 679 ntBASIC24.59■■□□□ 1.53
HFM1A2PYH4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC24.59■■□□□ 1.53
HFM1A2PYH4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
HFM1A2PYH4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 AP3S2-216ENST00000617003 1561 ntBASIC24.58■■□□□ 1.53
HFM1A2PYH4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC24.58■■□□□ 1.53
HFM1A2PYH4 MIR770-201ENST00000390219 98 ntBASIC24.58■■□□□ 1.53
HFM1A2PYH4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 FAM86GP-201ENST00000448322 971 ntBASIC24.58■■□□□ 1.53
HFM1A2PYH4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 AC067863.1-201ENST00000494933 530 ntBASIC24.58■■□□□ 1.53
HFM1A2PYH4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC24.58■■□□□ 1.53
HFM1A2PYH4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms