Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 KRT18P22-201ENST00000402024 1347 ntBASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 STARP1-201ENST00000397973 869 ntBASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 AL359075.1-203ENST00000462729 1002 ntBASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 AL390719.2-201ENST00000606993 987 ntBASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 MST1L-201ENST00000442552 2185 ntBASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV18A0A075B6X5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 AC125634.1-201ENST00000438758 1403 ntBASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV18A0A075B6X5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 HLA-J-202ENST00000469281 1241 ntBASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 AC073912.3-201ENST00000624414 853 ntBASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV18A0A075B6X5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 AC023824.1-201ENST00000562945 2975 ntBASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 AC092384.3-202ENST00000564646 2873 ntBASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms