Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 CYMP-203ENST00000474680 1263 ntBASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 KRT8P48-201ENST00000515599 1220 ntBASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 AC093028.1-201ENST00000622998 982 ntBASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB2Q9Y5E7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 DUX4L17-201ENST00000557360 1267 ntBASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 FRMD8P1-201ENST00000440433 1524 ntBASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 SLC22A20-204ENST00000530038 1673 ntBASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB2Q9Y5E7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 HCG4-201ENST00000418983 998 ntBASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 SPDYE11-202ENST00000450699 704 ntBASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms