Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 AC097637.2-201ENST00000624096 1997 ntBASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RHBDD3Q9Y3P4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 GPR89P-201ENST00000407924 1495 ntBASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 PCDHB17P-201ENST00000539533 2393 ntBASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 AC073592.4-201ENST00000623827 446 ntBASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RHBDD3Q9Y3P4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 HLA-A-202ENST00000376806 1854 ntBASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AC008894.3-201ENST00000624324 3103 ntBASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 KRT18P31-201ENST00000506277 1292 ntBASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AC106795.1-205ENST00000512851 1056 ntBASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 AL121772.3-201ENST00000610840 674 ntBASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RHBDD3Q9Y3P4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms