Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHANK2Q9UPX8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 GPR53P-205ENST00000457298 1084 ntBASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 SPDYE18-201ENST00000510091 1050 ntBASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 WASH4P-201ENST00000564273 1246 ntBASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 AC140912.1-201ENST00000577171 1054 ntBASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
SHANK2Q9UPX8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 SPDYE17-201ENST00000412399 783 ntBASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 KRT17P7-201ENST00000451704 1104 ntBASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 RN7SL618P-201ENST00000477850 296 ntBASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 AC024267.1-201ENST00000582320 895 ntBASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 AC084346.2-201ENST00000607097 949 ntBASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC24.64■■□□□ 1.53
SHANK2Q9UPX8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 AC120498.9-201ENST00000339021 3867 ntBASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC24.63■■□□□ 1.53
SHANK2Q9UPX8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC24.62■■□□□ 1.53
SHANK2Q9UPX8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms