Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 AL513210.1-201ENST00000629608 234 ntBASIC16.54■□□□□ 0.24
SATB2Q9UPW6 AC092902.6-201ENST00000641783 218 ntBASIC16.54■□□□□ 0.24
SATB2Q9UPW6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SATB2Q9UPW6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 AC004461.1-201ENST00000412461 403 ntBASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CXCL1P1-201ENST00000502804 216 ntBASIC16.53■□□□□ 0.24
SATB2Q9UPW6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 AC068137.2-201ENST00000605408 478 ntBASIC16.53■□□□□ 0.24
SATB2Q9UPW6 LINC01451-201ENST00000623792 534 ntBASIC16.53■□□□□ 0.24
SATB2Q9UPW6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 AL355312.1-201ENST00000407115 2176 ntBASIC16.53■□□□□ 0.24
SATB2Q9UPW6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.53■□□□□ 0.24
SATB2Q9UPW6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 LINC00304-203ENST00000565008 1864 ntBASIC16.52■□□□□ 0.24
SATB2Q9UPW6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 BCRP1-201ENST00000444246 691 ntBASIC16.52■□□□□ 0.24
SATB2Q9UPW6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SATB2Q9UPW6 AC105339.1-204ENST00000636249 355 ntBASIC16.52■□□□□ 0.24
SATB2Q9UPW6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.52■□□□□ 0.23
SATB2Q9UPW6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.52■□□□□ 0.23
SATB2Q9UPW6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SATB2Q9UPW6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.52■□□□□ 0.23
SATB2Q9UPW6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SATB2Q9UPW6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms