Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGB4Q9UN71 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 AL121956.5-201ENST00000625261 221 ntBASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB4Q9UN71 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.39■□□□□ 0.22
PCDHGB4Q9UN71 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 CHCHD2P8-201ENST00000429873 447 ntBASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 STK25P1-201ENST00000585406 838 ntBASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 AC092053.1-201ENST00000605787 1936 ntBASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB4Q9UN71 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms