Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 AC004461.1-201ENST00000412461 403 ntBASIC17.74■□□□□ 0.43
CDH9Q9ULB4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 KRT8P48-201ENST00000515599 1220 ntBASIC17.74■□□□□ 0.43
CDH9Q9ULB4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 AC243562.1-201ENST00000560672 389 ntBASIC17.73■□□□□ 0.43
CDH9Q9ULB4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 AL671710.1-201ENST00000610245 2349 ntBASIC17.73■□□□□ 0.43
CDH9Q9ULB4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH9Q9ULB4 AC106820.2-201ENST00000563775 3264 ntBASIC17.73■□□□□ 0.43
CDH9Q9ULB4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 AC079140.1-201ENST00000508039 487 ntBASIC17.72■□□□□ 0.43
CDH9Q9ULB4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms