Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDE1Q9NXR1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.37■□□□□ 0.21
NDE1Q9NXR1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
NDE1Q9NXR1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDE1Q9NXR1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDE1Q9NXR1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDE1Q9NXR1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDE1Q9NXR1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 IGHGP-201ENST00000390555 1178 ntBASIC16.36■□□□□ 0.21
NDE1Q9NXR1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 AC103564.2-201ENST00000432853 1299 ntBASIC16.36■□□□□ 0.21
NDE1Q9NXR1 AP003733.1-201ENST00000491725 852 ntBASIC16.36■□□□□ 0.21
NDE1Q9NXR1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 MIR4785-201ENST00000585005 73 ntBASIC16.36■□□□□ 0.21
NDE1Q9NXR1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.36■□□□□ 0.21
NDE1Q9NXR1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 AL353692.3-201ENST00000407031 1396 ntBASIC16.36■□□□□ 0.21
NDE1Q9NXR1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.36■□□□□ 0.21
NDE1Q9NXR1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 AP002414.2-201ENST00000591780 3365 ntBASIC16.35■□□□□ 0.21
NDE1Q9NXR1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.35■□□□□ 0.21
NDE1Q9NXR1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDE1Q9NXR1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms