Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL031731.1-201ENST00000642131 2094 ntBASIC16.73■□□□□ 0.27
SSU72Q9NP77 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSU72Q9NP77 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSU72Q9NP77 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSU72Q9NP77 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.73■□□□□ 0.27
SSU72Q9NP77 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 SIGLEC16-201ENST00000599858 1437 ntBASIC16.72■□□□□ 0.27
SSU72Q9NP77 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 TOP3BP1-201ENST00000420768 1380 ntBASIC16.72■□□□□ 0.27
SSU72Q9NP77 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.72■□□□□ 0.27
SSU72Q9NP77 TP73-AS1-210ENST00000637775 1455 ntBASIC16.72■□□□□ 0.27
SSU72Q9NP77 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSU72Q9NP77 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 KRT8P39-201ENST00000396270 1433 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AC099063.4-201ENST00000641099 1602 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AC112504.1-201ENST00000623415 1841 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 INTS4P1-201ENST00000438455 1935 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 LINC00982-205ENST00000420957 435 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 VENTXP7-201ENST00000475503 772 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AP000867.4-201ENST00000641616 219 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 AC006058.4-201ENST00000624016 1670 ntBASIC16.71■□□□□ 0.27
SSU72Q9NP77 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSU72Q9NP77 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.71■□□□□ 0.27
SSU72Q9NP77 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSU72Q9NP77 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSU72Q9NP77 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SSU72Q9NP77 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 CDC14C-201ENST00000428251 1719 ntBASIC16.7■□□□□ 0.26
SSU72Q9NP77 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.7■□□□□ 0.26
SSU72Q9NP77 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSU72Q9NP77 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms