Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GCM1Q9NP62 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GCM1Q9NP62 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 AC092053.1-201ENST00000605787 1936 ntBASIC14.41□□□□□ -0.1
GCM1Q9NP62 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 CRYGEP-201ENST00000412192 528 ntBASIC14.41□□□□□ -0.1
GCM1Q9NP62 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.41□□□□□ -0.1
GCM1Q9NP62 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GCM1Q9NP62 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GCM1Q9NP62 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 MIR574-201ENST00000385209 96 ntBASIC14.4□□□□□ -0.1
GCM1Q9NP62 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 VN2R19P-201ENST00000442399 1052 ntBASIC14.4□□□□□ -0.1
GCM1Q9NP62 AL591424.1-201ENST00000442569 1213 ntBASIC14.4□□□□□ -0.1
GCM1Q9NP62 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 AC124947.2-201ENST00000547118 1133 ntBASIC14.4□□□□□ -0.1
GCM1Q9NP62 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 AC027601.4-201ENST00000611259 610 ntBASIC14.4□□□□□ -0.1
GCM1Q9NP62 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GCM1Q9NP62 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GCM1Q9NP62 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms