Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 HMGA1P7-201ENST00000406908 502 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 KRT18P3-201ENST00000451602 1288 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 AL031432.2-201ENST00000566714 459 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 AL928711.1-201ENST00000570165 459 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 AC064836.3-201ENST00000607928 673 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 UBALD1-205ENST00000590891 2641 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.72■□□□□ 0.43
LHX5Q9H2C1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LHX5Q9H2C1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 AC099398.1-201ENST00000567919 2776 ntBASIC17.71■□□□□ 0.43
LHX5Q9H2C1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.71■□□□□ 0.43
LHX5Q9H2C1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LHX5Q9H2C1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LHX5Q9H2C1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
LHX5Q9H2C1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LHX5Q9H2C1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms