Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 RCN1P2-201ENST00000398357 915 ntBASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 ACTG1P4-201ENST00000425123 1122 ntBASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 SLC25A1P1-201ENST00000528351 927 ntBASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 DUX4L17-201ENST00000557360 1267 ntBASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 AC011467.2-201ENST00000598425 242 ntBASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 AL031284.1-201ENST00000419297 478 ntBASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 KRT18P67-201ENST00000432816 1264 ntBASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 AF186996.4-201ENST00000467186 377 ntBASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXP3Q9BZS1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ME2P1-201ENST00000426028 1970 ntBASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 TP73-AS1-210ENST00000637775 1455 ntBASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 AC073592.5-201ENST00000624854 528 ntBASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 AL139011.1-202ENST00000642063 584 ntBASIC17.4■□□□□ 0.38
FOXP3Q9BZS1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms