Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 EIF2S2P3-201ENST00000428356 999 ntBASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC092905.1-201ENST00000467527 949 ntBASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC009533.2-201ENST00000543664 586 ntBASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AL365223.1-201ENST00000574864 1297 ntBASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AP005901.3-202ENST00000581653 237 ntBASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC068313.1-201ENST00000604028 1008 ntBASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AP000720.1-201ENST00000625091 483 ntBASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC8.58□□□□□ -1.04
KRTAP3-1Q9BYR8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AC004817.3-201ENST00000602957 2129 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AL671710.1-201ENST00000610245 2349 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 GGT3P-204ENST00000453783 1664 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ACTG1P4-201ENST00000425123 1122 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 MTND2P25-201ENST00000449028 610 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 RPL12P24-201ENST00000474907 486 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AC090079.2-201ENST00000575289 768 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AC090616.6-201ENST00000582640 721 ntBASIC8.57□□□□□ -1.04
KRTAP3-1Q9BYR8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms