Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 ALG1L8P-201ENST00000533887 760 ntBASIC17.5■□□□□ 0.39
LRRC3Q9BY71 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.5■□□□□ 0.39
LRRC3Q9BY71 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRC3Q9BY71 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.49■□□□□ 0.39
LRRC3Q9BY71 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 CROCCP2-202ENST00000412962 2773 ntBASIC17.49■□□□□ 0.39
LRRC3Q9BY71 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 AC124947.2-201ENST00000547118 1133 ntBASIC17.49■□□□□ 0.39
LRRC3Q9BY71 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3Q9BY71 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.49■□□□□ 0.39
LRRC3Q9BY71 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 MIR943-201ENST00000401286 94 ntBASIC17.48■□□□□ 0.39
LRRC3Q9BY71 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AC107890.1-201ENST00000422478 521 ntBASIC17.48■□□□□ 0.39
LRRC3Q9BY71 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AC093214.1-201ENST00000511688 1107 ntBASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AC140878.1-201ENST00000565277 250 ntBASIC17.48■□□□□ 0.39
LRRC3Q9BY71 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 AJ011932.1-201ENST00000621707 465 ntBASIC17.48■□□□□ 0.39
LRRC3Q9BY71 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3Q9BY71 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms