Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 IGHV3-72-202ENST00000621503 303 ntBASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 CROCCP2-202ENST00000412962 2773 ntBASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AL391825.1-201ENST00000457671 1364 ntBASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 DGCR5-201ENST00000399539 862 ntBASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AC135586.1-201ENST00000539323 574 ntBASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AC013467.2-201ENST00000605472 835 ntBASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTFDC1Q9BY42 AC018470.1-201ENST00000624790 3129 ntBASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 GNAQP1-201ENST00000444815 1067 ntBASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 GIMAP3P-201ENST00000495150 836 ntBASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 AC010336.2-201ENST00000564226 506 ntBASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 AC104794.3-201ENST00000566840 1248 ntBASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 AC004790.1-201ENST00000612686 536 ntBASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.22■□□□□ 0.83
RTFDC1Q9BY42 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 IGHV3-71-201ENST00000523324 359 ntBASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms