Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PAAF1Q9BRP4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PAAF1Q9BRP4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 MIR943-201ENST00000401286 94 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AC055876.3-201ENST00000431496 288 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AC125807.1-201ENST00000483097 614 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AC093214.1-201ENST00000511688 1107 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AC012313.1-201ENST00000593393 3059 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 AC138649.4-201ENST00000612222 287 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 MIR6080-201ENST00000617359 66 ntBASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PAAF1Q9BRP4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 FO538757.1-201ENST00000623083 1397 ntBASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 TREML5P-201ENST00000421694 576 ntBASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PAAF1Q9BRP4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.83■□□□□ 0.45
PAAF1Q9BRP4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAAF1Q9BRP4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.83■□□□□ 0.45
PAAF1Q9BRP4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PAAF1Q9BRP4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAAF1Q9BRP4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PAAF1Q9BRP4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 AC107890.1-201ENST00000422478 521 ntBASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 KRT18P34-201ENST00000488218 1270 ntBASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PAAF1Q9BRP4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PAAF1Q9BRP4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms