Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SEC22CQ9BRL7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.29□□□□□ -0.12
SEC22CQ9BRL7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC22CQ9BRL7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC22CQ9BRL7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SEC22CQ9BRL7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC22CQ9BRL7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.27□□□□□ -0.12
SEC22CQ9BRL7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 MYCLP1-201ENST00000372451 1075 ntBASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 AC116562.2-201ENST00000507042 360 ntBASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 MIR3917-201ENST00000580971 93 ntBASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.27□□□□□ -0.13
SEC22CQ9BRL7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 NUDT16P1-203ENST00000513809 620 ntBASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 AC009154.2-201ENST00000621177 724 ntBASIC14.26□□□□□ -0.13
SEC22CQ9BRL7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms