Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.27■□□□□ 0.68
ARID3AQ99856 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ARID3AQ99856 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ARID3AQ99856 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
ARID3AQ99856 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.27■□□□□ 0.68
ARID3AQ99856 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.27■□□□□ 0.68
ARID3AQ99856 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 AC009154.2-201ENST00000621177 724 ntBASIC19.27■□□□□ 0.68
ARID3AQ99856 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 KRT8P47-201ENST00000604727 1398 ntBASIC19.27■□□□□ 0.68
ARID3AQ99856 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.27■□□□□ 0.68
ARID3AQ99856 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.27■□□□□ 0.68
ARID3AQ99856 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
ARID3AQ99856 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARID3AQ99856 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ARID3AQ99856 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ARID3AQ99856 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARID3AQ99856 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.27■□□□□ 0.67
ARID3AQ99856 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ARID3AQ99856 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARID3AQ99856 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARID3AQ99856 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.26■□□□□ 0.67
ARID3AQ99856 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.26■□□□□ 0.67
ARID3AQ99856 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 KRT18P55-202ENST00000578578 1546 ntBASIC19.26■□□□□ 0.67
ARID3AQ99856 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.26■□□□□ 0.67
ARID3AQ99856 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ARID3AQ99856 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.26■□□□□ 0.67
ARID3AQ99856 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARID3AQ99856 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.26■□□□□ 0.67
ARID3AQ99856 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.26■□□□□ 0.67
ARID3AQ99856 IER3-202ENST00000376377 1350 ntBASIC19.26■□□□□ 0.67
ARID3AQ99856 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.26■□□□□ 0.67
ARID3AQ99856 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.26■□□□□ 0.67
ARID3AQ99856 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARID3AQ99856 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.25■□□□□ 0.67
ARID3AQ99856 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ARID3AQ99856 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.25■□□□□ 0.67
ARID3AQ99856 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.25■□□□□ 0.67
ARID3AQ99856 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
ARID3AQ99856 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ARID3AQ99856 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.25■□□□□ 0.67
ARID3AQ99856 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.25■□□□□ 0.67
ARID3AQ99856 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ARID3AQ99856 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 LYSMD4-203ENST00000378904 2122 ntBASIC19.25■□□□□ 0.67
ARID3AQ99856 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ARID3AQ99856 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARID3AQ99856 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ARID3AQ99856 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.24■□□□□ 0.67
ARID3AQ99856 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ARID3AQ99856 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ARID3AQ99856 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms