Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.86■□□□□ 0.29
CPNE1Q99829 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.86■□□□□ 0.29
CPNE1Q99829 AL589182.2-201ENST00000619332 1049 ntBASIC16.86■□□□□ 0.29
CPNE1Q99829 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE1Q99829 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE1Q99829 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE1Q99829 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CPNE1Q99829 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE1Q99829 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 AC022188.1-201ENST00000620960 1664 ntBASIC16.85■□□□□ 0.29
CPNE1Q99829 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.85■□□□□ 0.29
CPNE1Q99829 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE1Q99829 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPNE1Q99829 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.85■□□□□ 0.29
CPNE1Q99829 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 NKAPP1-205ENST00000585790 367 ntBASIC16.85■□□□□ 0.29
CPNE1Q99829 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.85■□□□□ 0.29
CPNE1Q99829 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE1Q99829 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE1Q99829 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE1Q99829 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CPNE1Q99829 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE1Q99829 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE1Q99829 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CPNE1Q99829 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE1Q99829 AL356309.3-201ENST00000624132 1934 ntBASIC16.84■□□□□ 0.29
CPNE1Q99829 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE1Q99829 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CPNE1Q99829 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE1Q99829 PAWRP1-201ENST00000451083 565 ntBASIC16.84■□□□□ 0.29
CPNE1Q99829 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE1Q99829 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CPNE1Q99829 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.84■□□□□ 0.29
CPNE1Q99829 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 GGT3P-204ENST00000453783 1664 ntBASIC16.84■□□□□ 0.29
CPNE1Q99829 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE1Q99829 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE1Q99829 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE1Q99829 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE1Q99829 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE1Q99829 AC046158.3-201ENST00000624947 2558 ntBASIC16.84■□□□□ 0.29
CPNE1Q99829 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
CPNE1Q99829 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE1Q99829 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CPNE1Q99829 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE1Q99829 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE1Q99829 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CPNE1Q99829 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE1Q99829 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
CPNE1Q99829 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE1Q99829 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CPNE1Q99829 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE1Q99829 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE1Q99829 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms